Lars Snipen
Norwegian University of Life Sciences


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Master projects in microbial genomics

 

Here are some suggested master projects in microbial genomics.

 

A reduced version of some of these may also be used for Bachelor projects.

 

Feel free to also suggest some projects on your own. Send me an email if you want to discuss this with me.

 

 

 

Ongoing master projects

 

Nora Bull: Ethnicity-associated evolutionary patterns in human microRNA (collaboration with Simon Rayner, UiO)

Kristin Kleivan Solberg: Stress-tolerance associated genes and antimicrobial resistance (collaboration with Dzung Bao Diep, LMG at KBM)

Trude Haug Almestrand: DeepGene – improved prokaryotic gene finding (collaboration with Kristian Hovde Liland, Data Science at RealTek)

Ingvild Frøberg Mathisen: Comparing deep neural network architectures for the prediction of antibody/antigen binding (collaboration with Victor Greiff, UiO)

Helene Drennan Olsen: Reduced Metagenome Sequencing resolution in the human gut (collaboration with Knut Rudi, MiDiv, KBM)

Andrea Obstfelder: Comparative genomics of Salmonella Typhimurium in Norway (collaboration with Camilla Sekse, Karin Lagesen, Veterinary Institute)

 

 

 

 

Previous master projects

 

Here are some previous Master-projects where I was main supervisor:

 

Annette Fagerlund, 2021 (Confidential, at NOFIMA). Evolution and phylogenetics for Listeria monocytogenes

 

Kristina Severine Rudskjær Stenløkk, 2019

 

Maren-Helene Høie Degnes, 2019

 

Jens Rasmus Liland, 2019

 

Annbjørg Helene Nygaard Barbakken, 2019

 

Abira Sivanesan, 2019 (Confidential, at FHI). In silico exploration of stx2apositive (STEC) and stx-negative Escherichia coli (STEC-LST)

 

Gard Kroken, 2018

 

Benedicte Been Simensen, 2015

 

Kim Erik Grashei, 2014